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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale of data enabled by these approaches creates a vast resource … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State … Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from the …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …

… the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying …

… UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, … biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, … environment.  During the tours through four national user facilities located at Berkeley Lab, including the JGI, …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out … Adding Value Beyond Genome Sequences Much of the data had been generated from environmental samples  …

… (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale projects at … span disciplines and scales,” said Tanja Woyke , the JGI’s User Programs Deputy. “These proposals highlight the …

… December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … “EMSL’s 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center …

… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team …

… Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global …