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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Genomic Features Predict Bacterial Life History Strategies in Soil, as Identified by Metagenomic Stable Isotope Probing
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The … Colorado State University researchers led a consortium to study river microbiomes. To understand the microbiology of … Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, … in defense, nutrient acquisition and communication. Studying how these compounds are biosynthesized and their … The Secondary Metabolites Program targets the vast and …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest … faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new cotton work, … cotton genome ( G. raimondii ) several years ago. Studying the cotton genomes provides breeders with insights …
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The Power of One, Amplified
… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … cannot be cultivated in the lab. What makes this particular study unique is the application of single cell genomics to a …
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Learning to Look
… expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … the way we currently isolate and extract viruses,” said the study’s lead author Simon Roux, a JGI research scientist in … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 …
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant … his postdoctoral work at the Massachusetts Institute of Technology he developed a high throughput approach for …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … also analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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