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… yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional … a taxonomically diverse suite of microbial chassis strains for elevated opportunity for expression. Research Team    … For further details, …

For the first time in several years, the DOE Joint Genome … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein … and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor …

… the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … the Hess Lab at UC Davis. “It was a really huge effort in tool development and … that was really the foundation for …

Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … impact of user projects, develop cutting edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help …

The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …

… help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s project. See below for details on each step. … Please review our FAQ in advance … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …

… and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published … Berkeley National Laboratory, have developed a semi-automated pipeline to apply robotics to the process. This …

Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. …

… in professional development enrichment activities. For some students in the 2021 cohort, this was their first … P. hallii Mutant Library … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional … … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for Complete …

For the Joint Genome Institute, the end of 2018 was marked … quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for Integrative and Collaborative Genome Science , the …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete …