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Dan Rokhsar
… computational methods applicable to the diverse eukaryotic species, which they have applied and refined in the …
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Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface
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The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation
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Ian Blaby
… reveals the impact of hydrogen peroxide on protein stress responses and overlap with other stress transcriptomes. The … reinhardtii reveals continuous cell and metabolic differentiation. The Plant Cell . 27: 10, 2743-2769. 2015 …
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Cultivating Symbiotic Antarctic Microbes
… the Nha-C cells were interacting with another abundant species in the enrichment cultures,  Hrr. lacusprofundi … was discovered with proteomic analyses. The species harbors genes encoding SPEARE proteins—which … team to closely study the nature of the Nanohaloarchaeota species’ symbiotic relationship. …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more organized. “The big … Woyke said. “Yet the project took us into a very different direction,” she added. Volland took on the … and whether or not pepins are present in other bacterial species. The precise formation of pepins and how molecular …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… the genomes of two varieties of a close relative and model species. The following year saw the beginnings of common … decades of research, switchgrass has become an important species whose complex genomes are helping breeders …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… scientists have shown at least two microorganisms from different phyla are capable of methanogenesis. Using … takes place in the context of the genetic material of many different organisms in an environment, all at once — rather … necessarily rely on methanogenesis to survive. They’ve got different metabolic pathways too — like anaerobic …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on investigating the … of Duke University is interested in understanding which species of mycorrhizal fungi are important for poplar plant health, in part to learn how these species can modulate their behavior in the presence of other …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… how much help can users expect for data analysis of the different omics analysis? Are users expected to be trained to handle the huge amounts of data for each of the different analysis? A:  We go from sample submission to data …
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SIPs with Standards
… (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to make this technique, SIP, …
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The fungus that made itself at home
… from North America – against a third fungal Serpula species, S. himantioides from Europe, that was sequenced and … wood blocks of pine, fir, and spruce, they grew a Serpula species and a non- Serpula brown rot. The researchers found …
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