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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, bacteria, … Yasuo Yoshikuni, head of the JGI’s DNA Synthesis Science program, underscored the value of taking a look at the AT …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … DOE Office of Biological and Environmental Research (BER) program. In service of solutions that will impact society, … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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Virus Discoveries that Keep Getting Bigger
… work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments … over the world, scientists have discovered giants among viruses. Now categorized in their own phylum,  … simultaneously, these genomic studies provide information about virus hosts. As a result, the outcomes of these …
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The widespread IS200/605 transposon family encodes diverse programmable RNA-guided endonucleases
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A Plant Root Atlas for Tracking Developmental Trajectories
… single root cells and combining the information with previously published datasets. The work was  recently published in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the paper also aligns with his DOE  Early Career Research Program (ECRP) award, which is also focused on single-cell …
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Supporting Global Research into Actinomycetes
… special groups of actinobacteria Streptomyces is more than just a funny word. The 500 species described within the group … new antiviral medicines and treatments for infectious disease. Streptomycetes are also abundant in soil and can … in the JGI Natural Prodcast podcast , where she talks about this community resource. ) “Most people study …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … under the Facilities Integrating Collaborations for User Science (FICUS) initiative through an award to MBD and …
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Mapping the Earth’s Hidden Fungal Kingdom
… To put this evolutionary timescale in perspective, the genus Aspergillus has been evolving for 82 million years, … and ancient origins, fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among those … Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling …
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JGI Hosts GPU Hackathon in May
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … either jumpstart acceleration or optimize their code on GPUs. While the  OLCF is organizing nearly a dozen hackathons … to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they … a cold-adapted microalga: the diatom Fragilariopsis cylindrus . At that time, they noted that the F. cylindrus genome …
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) … leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data …
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