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Game On: High School Students Drive Everglades Metagenomics Study
… Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four … different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. …
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Neha Varghese
… software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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Tracing the Evolution of Shiitake Mushrooms
… highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name … besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from around the world. By … work (proposal:10.46936/10.25585/60001048) conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… science that will help solve energy and environmental challenges.   Scanning the California oak woodlands from the … to a pathogen. This ‘“alien’” organism — one previously unseen — is, in fact, a microscopic water mold, … scores of nurseries across the nation, elevating concerns about the pathogen to an all-time high. California …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … University of Minnesota to establish the Natural Products Genomics Resource Center. To help enable the discovery of … University of East Anglia was also approved to learn more about the roles of diatoms in carbon fixation and in aquatic …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just … Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS proposals have helped advance …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… science that will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow … Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA derived from individual …
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Antiquaquibacter oligotrophicus gen. nov., sp. nov., a novel oligotrophic bacterium from groundwater
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… all that it has contributed, and what they’re excited about in JGI’s future. Find recordings and recaps of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s … to be junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many …
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