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… we have our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …

…     Our homepage video includes external footage from:  University of Delaware Laura.Selbmann©PNRA. All the … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and …

… lot going on, so I took a little break, but I’m hoping that from here I can get back to a regular schedule. I’m going to … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … secondary metabolism analysis and research as a driver for novel technologies that can serve all JGI users. Nigel has a …

We focus our efforts on integrating database mining and sequence design with scaling the production of large, … on developing methods for converting digital information from sequence databases into biotechnological or … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven …

QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage (from PacBio) Best practices for High Molecular Weight DNA … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … relationships as well as insights into clade-specific novelties and expansions.  … The SMC provides complete …

… projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …

… genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their … marker genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying …

Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated … now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with …

Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …