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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … all user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating …
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Frequently Asked Questions: Project Management
… You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and …
Learn more
Natural Prodcast Episode 24: Jackie Winter and SMC
… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” is … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … performs sequencing, metabolomics and synthesis on behalf of the U.S. Department of Energy Bioenergy Research …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … to soil carbon storage during simulated range shifts of plant-fungal symbionts …
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Programs & Platform Leads
… genome science capabilities to support BER's mission of achieving a predictive understanding of complex … energy and infrastructure security. In complement to the Community Science Program, JGI researchers drive innovations … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … and protein folding models, to improve the accuracy of functional predictions and speed up genome analysis. …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk …
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Natural Prodcast Episode 15: Katherine Duncan
… Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … of those within that cluster, you can begin to infer the function of the other molecules. Dan Udwary: Yeah, it’s– …
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Natural Prodcast Episode 17: Cassandra Quave
… culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … that morning cup of coffee, that is a plant that has a functional activity. It’s a pharmacological agent that acts … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? …
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective … management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee … and quality. The Committee does not perform management functions nor does it direct the Programs' management teams …
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Natural Prodcast Episode 3: The Primer, Part 3
… able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less … what those molecules actually are, and then what their function might be. Whether that’s in nature, or whether …
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