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… plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for … roles in processes such as nutrient cycling, plant-microbe interactions, and environmental responses. The program … into functional genomics. A key focus is understanding the interactions between  plants, microbes, and soils relevant …

… enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … DAN UDWARY: That’s weird. I hadn’t heard that before. Why is that? Why would that be the case? ALISON NARAYAN: …

… drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … … networks governing terpenoid-mediated plant environment interactions to enable advanced bioenergy crops … … moisture treatments … Metabolic processes and trophic interactions in Antarctic cryptoendolithic communities … CSP …

… in Nature and Medicine.” It’s obviously focused more on the bacterial side of the field, and it’s a little hard to find … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …

… and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark matter … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

… viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes. Nature …

… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

… organisms, to looking at pathways, and to looking at the interactions of organisms and environments.  DAN: Where do … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual …

… 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in marine and terrestrial environments, actinobacteria play … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …

… delicately above the leaf debris are revealed to be single bacterial cells, visible to the naked eye. The unusual size … The bacterium itself was discovered by Olivier Gros, a marine biology professor at the Université des Antilles in … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …

… years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no …

… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … and personnel resources for genomic research and sequence-based science.  Projects include de novo generation …