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Mission
…     Our homepage video includes external footage from:  University of Delaware Laura.Selbmann©PNRA. All the … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission areas of …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… come from livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded … to provide a cataloged and curated culture and genome sequence resource of rumen microorganisms . Thanks to the … rumen microbes are awesome and this is just another example why.” …
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Synthesis
… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … platform enables users to validate hypotheses generated from mining genomic data by designing and assembling … design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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Institutional User Agreements
… and delays on the work. The transfer of a proposal from one commercial institution to a new commercial … Before work can begin on proposals submitted by researchers from another DOE National Laboratory, a JGI-BDLUA ,  BDLUA … multiple collaborator proposals submitted by researchers from another Federal Agency, all collaborating institutions …
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Frequently Asked Questions: Proposal Submission
… are open to both domestic and international applicants from any institution type and at any career stage. … for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to … listing of approved proposals can be found here. All sequence data will be accessible on the JGI Data Portal.   … …
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Frequently Asked Questions: Project Management
… by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for … be accessed via the Genome Portal , at the following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …
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Natural Prodcast Episode 9: Roger Linington
Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Natural Prodcast Episode 19: Bill Fenical
… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … you think about the fact that, when plants and animals and microbes evolve, they evolve to make molecules that improve … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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Metabolomics
JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … variety of experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well … types of molecules.   … Find more details on the instrumentation we use and our methodology for metabolite …
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Secondary Metabolites Program
… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, … of horizontal gene transfer. … The SMC provides complete sequence and annotation data for secondary metabolite …
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DNA Synthesis Program
DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … Science Group supports researchers exploring how to convert sequence into functional assessments. The team has a …
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Marine Microbe Contains Multitudes
In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …
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