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… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less … proteins that are enzymes that are doing the reactions to generate secondary metabolites. ALISON: Sounds easy enough? … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

Our research is focused on the discovery and characterization of … in cell biology. 25 (6), 339-346 Schulz et al. (2015) Marine amoebae with cytoplasmic and perinuclear symbionts … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …

Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways …

… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot … Nigel Mouncey. I got him on to talk about JGI’s vision for secondary metabolism, his past in industry in developing … We had a really beautiful fermentation development lab and research lab all the way from Ambr250 fermenters to 2 liter …

National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and …

… high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to learn more.   … SPPs enable research funded by an Industry partner to perform a defined … right, title, and interest to any intellectual property generated under the agreement. … CRADAs enable research …

… to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk …   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … was splitting his time between Bill Gerwick’s lab and doing research in Panama through support from the ICBG training … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast …

… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … and quality of finished product depend on genome. Selected genomes will be improved based on feasibility and scientific … For counting: text file of gene counts (mapped against reference transcriptome or de novo assembly), DGE, alignment …

The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … exactly what we're trying to do. And we're also trying to generate syntheses of these molecules so that we can … in is actually seeing whether we could go into the genomes and predict what the natural product might actually …