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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … me, she’s a genome miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in … ZIEMERT: So we started with soil. But we also have, in collaboration with other people, lake sediments. We have …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … virgatum ) experimental data. Sarah:  How important is collaboration in the big data and plant science community? …
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … mention is FICUS, which stands for “ Facilities Integrating Collaborations for User Science .” This is kind of like a … awesome for a CSP, or if you’re a new investigator who wants to try out something smaller scale, or if you’re just …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … Duisburg-Essen (UDE), Germany with the aim of intensifying collaborations in the fields of genomics, structural … of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, Stephan …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … are hard. But, I’m working on it because I really do want you all to hear this great conversation with Aaron Puri. …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … do you introduce me? Dan: Yeah.  Brad: Oh my god. That’s a complicated one. Dan: So, Brad Moore is a professor at UCSD … tell me about that. What sparked it? I mean, what made you want to work in natural products following him? I know a lot …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … products in some way, shape, or form. And so do you want to tell us a little bit about what got you into natural … currently? ALISON NARAYAN: Yeah. So– yeah, with our collaboration with JGI , we basically designed a library …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens
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Metagenome Program
… to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with … that support user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on …
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Data Ecosystem
… tools specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek …
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