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… shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing … and quality of finished product depend on genome. Selected genomes will be improved based on feasibility and scientific … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… have a better understanding of what is what. This is not new. It actually was first proposed by two authors called … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how …

The focus of this group, in recent years, has been to bring generalizable … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for … Team    … For further details, please reach out to the Group Lead …

… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … in how the community itself works together to elicit new metabolite production. And we are also interested in how … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …

I worked on a team at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept … in about a year’s time, we’d be doing a rate of around 1000 genomes per year and an order of magnitude more than … Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And …

… plant-microbe interactions, advancing efforts to create renewable energy sources and bolster agricultural resilience. … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant …

… which might lead you to changes in bioactivity, and new uses for these peptides in medicine or materials science … student, and he told me if I wanted to get into his group that I would have to cut it, and so I came in the next … of 10,000 species. And whenever you’re talking about a new species with natural products in different species, …

… by what’s called “find and grind”. So you would find some new source that you hadn’t explored before. Like, you know, … C, and you’ve got a new molecule, right? And so if you have 1000 A’s and 1000 B’s and 1000 C’s, then if you’ve got a … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

… in the field, you can probably skip straight on to Episodes 4 5 and 6, for some fun interviews, unless you want to fact … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … Secondary Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these …

Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. …