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User Support
IMG , GOLD and others for data annotation and submission Tracking, monitoring and expediting laboratory processing …
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Natural Prodcast Episode 24: Jackie Winter and SMC
UDWARY: OK. One of the– I don’t know. Maybe we ask you the boilerplate questions that I try to tend to ask to most … what happens with the wildfires, right? I mean, you’re in Northern California, and it doesn’t matter where they are. … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Metabolomics
… grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first episode up is another … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … disparate environments. There’s some marine. There’s some soil samples. There’s human gut samples. There’s lots and …
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Candidatus Abditibacter, a novel genus within the Cryomorphaceae, thriving in the North Sea
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Microbiome Data Science Team
… a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … bacteria and archaea.  Nature Biotechnology  35(8):725-731 Mukherjee S, et al. (2017) 1,003 reference genomes of …
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Metagenomes from two microbial consortia associated with Santa Barbara seep oil
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Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities
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Natural Prodcast Episode 23: Aaron Puri
… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … named Mary Lidstrom at the University of Washington in Seattle . And she studies bacteria that grow on one-carbon … could imagine if you have two colonies of bacteria in the soil or something and they’re competing with each other, if …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … or online catalog, I guess. So we've also been able to get soils from Purdue campus itself and been able to actually … I think, discovered in E. coli, but we can utilize blast searches or other things like that in order to find them. …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The … to encourage their growth. In this instance, vegetable oil was injected into a specific type of food that was in … process, researchers collected microbial samples from wells at the site in 2007, 2009, and 2010. DNA was extracted …
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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