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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … water mold, genetically related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: … Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . …
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A Plant Root Atlas for Tracking Developmental Trajectories
… research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially … in wild type and cell identity mutants . Dev Cell. 2022 Feb 28. S1534-5807(22)00033-8.doi: 10.1016/j.devcel.2022.01.008 Relevant Links: Single-Cell Data Viewer Tool on …
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Natural Prodcast Episode 9: Roger Linington
Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … Gerwick as part of the International Biodiversity Drug Discovery consortium doing natural products isolation/structure … in the National Science Center there and ran this sort of semi independent research program, as part of my postdoc. It …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… was done to gain insights into gene families involved in adaptations seen in later plant lineages. The team found … … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy … US Department of Energy operated under contract no. DE-AC02-05CH11231. This project received funding from the …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … Science Program. For most months each year, Ace Lake is covered in thick ice, with a combination of marine and … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project …
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Tracking the Origins of Methane-Producing Microbes
… three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from a hot spring that has the … sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. …
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation
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Natural Prodcast Episode 11: Marnix Medema
… to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … especially if you want to know to which metagenome assembled genomes within a metagenome they belong and to which … to a whole different field like computational drug discovery field, which has been quite distinct from the natural …
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Metagenomics untangles potential adaptations of Antarctic endolithic bacteria at the fringe of habitability
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Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
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