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Fungal & Algal Program
… into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … seeks to expand our understanding of algal biology using genomics and multi-omics by working with research labs and … research and applied science. By advancing fungal and algal genomics, the program helps lay the groundwork for a …
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Natural Prodcast Episode 4: Nancy Keller
… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … parasite you really can’t grow well. You have to have it in cell culture. So we are going to see if we can express that … alone – I’m interested in pathogens. It’s just never a single microbe. And we have several recent papers and are …
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Sequencing of Genomes from Environmental Single Cells
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Examples: Successful LOIs & Submissions
… submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission … FICUS Example #1 … FICUS Example #2 …
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Metabolomics Program
… and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … gene expression, providing deeper insights into functional genomics. A key focus is understanding the interactions … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …
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Natural Prodcast Episode 15: Katherine Duncan
… to sort of compare, conceptually, that data with genomics and the kind of things that I do with genome … both of those things have still very much done to be excellently. Dan Udwary: For sure. Kate Duncan: Not that … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting to– so I … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … software as we need to go. JACLYN WINTER: You’re going to single-handedly cause like massive brownouts in California …
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Natural Prodcast Episode 5: Brad Moore
… the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …
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Data Ecosystem
… seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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User Programs
FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should … and metabolomics. Submission Deadline Check back Spring 2026 for the FY27 call Check back Spring 2026 for the FY27 …
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CSP New Investigator Call
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Power in isolation: insights from single cells
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