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… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer … talks to luminaries in the field about current and future developments, and how the JGI can be part of that space.   …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … high altitude! And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more … way – the RiPP way, is to make a protein using the normal cellular way of making proteins, with a ribosome. Then, some …

… has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in … Insider. She talks to lots of great scientists outside of secondary metabolism, and if you like what we’re doing here, …

… have hear over there, with a few more questions specific to secondary metabolites. I hope both versions are worth … to offer you. So there’s a lot of– we also have a lot of analysis pipelines, be it for, again, metagenome, … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …

… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with … for a long time about the evolution and natural products systems. This conversation came about because he challenged … about this, he’s very interested in very highly coevolved systems where a microbe becomes a symbiont, for example, of …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … microbiomes hold the amazing ability to influence plant development, fitness and health. This is a dynamic and … bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the …

MARCY: What are those– they make chemistry! And so they – secondary metabolites, specialized metabolites, however we … to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a … done a lot of work learning about how to use statistical analysis to prioritize both to analyze our bigger system …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … challenges were associated with getting good transformation systems going. That has a lot to do with, well, the fact … Then you have to maybe improve some of your bioinformatic analysis. You don’t want to get clusters that are encoding …

… for the broader scientific community and require constant developments to meet the ever-changing demands of our users. … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene clusters (BGCs) …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … wanted to be true to my roots, and always work with marine systems because that’s just where my innate curiosity and … Pacific Ocean, or in the bay, and be able to do chemical analysis, as well as transcript analysis. And what we’re …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode … in putting antibiotics together, getting them out of the cell letting them do their dirty work. So that’s one arm. … to unpack experimentally. But there’s a couple of different systems where people have made strides in that area. Where I …

… data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted to … in which data is publicly visible and available in JGI systems. Users not involved with the proposal under which …