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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … JGI will no longer produce use-restricted data except in already active projects as described above, but JGI portals …
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The …
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Special Initiatives & Programs
… . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the … negotiation with the JGI.  Investigators with grants funded by DOE-BER requiring support from the JGI may  submit … initiative that seeks to reduce U.S. gasoline consumption by 20% within 10 years through increased efficiency and …
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Project Management Office
Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of … that all work performed in its User Facilities be covered by the User Agreement. … PMO: Frequently Asked Questions … …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … You can view the status of your projects at any time by accessing various reports on the JGI Portal . Use the …
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A bacterial metapopulation adapts locally to phage predation despite global dispersal
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User Executive Committee Charter
… and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community … consecutive terms. A Chair and Vice-Chair will be selected by the UEC members for one-year terms, after which the … User meeting, with reasonable travel expenses to be paid by the JGI. There will be at least one other meeting held by …
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DNA Synthesis Program
… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … program supports cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for … and biochemically analyzing enzymes to support mission-driven research. Rapid Metabolic Engineering: Metabolic …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … has been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion … anything to do with the disease, but it’s going to be a linear polyketide that’s of the sort that people are looking …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy … Charles Gawad has been supported for this work by a Chan Zuckerberg Biohub Investigator Award, NIH …
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Products
… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw … ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … metadata, around the world. … NMDC is a community-driven national effort aimed to develop standards, …
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