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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular …
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Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as … technology called chassis-independent recombinase-assisted genome engineering (CRAGE), which offers single-step genomic …
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A genetic survey of heavily exploited, endangered turtles: caveats on the conservation value of trade animals
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Construction and comparison of three reference‐quality genome assemblies for soybean
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … eight of these weird bacteria. And we proposed to the Joint Genome Institute. DAN UDWARY: Oh, that’s where we come in. …
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Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These …
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SoyDB: a knowledge database of soybean transcription factors
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Mission
… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … see below.  … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a DOE Office of Science User …
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Partnerships: Myco-Ed
Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ …
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