Results
… are encouraged to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while samples that are of insufficient quality or quantity will …
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… a great opportunity to learn more about JGI, hear some excellent talk from our users and from other invited guests, … and the stabilized isotope probing work that we’re doing, single cell work we’re doing. And using these together along … work to link all this together and try to build a seamless pipeline that takes us through these different capabilities. …
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A metagenomic look at the soil microbes present a year after a wildfire. The Science … a multi-institutional team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming … one DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA …
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… of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, … all the time. We have compared three very different soils in the area around Tübingen that is almost next to … ZIEMERT: A lot of groups working together, having a lot of samples, sequencing a lot of environments, varied with a lot …
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… high throughput approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing … the Microscale Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of …
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… run them through, and they just have to sort of go into the pipeline for addition. So yeah. So it’s a big data … any DNA sequence really, and it will go through SMC’s pipeline. But then it will become public. Like, by … software as we need to go. JACLYN WINTER: You’re going to single-handedly cause like massive brownouts in California …
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… the action of the microbiome because if you sterilize the soil, the protective effect is gone. You can transplant the … sometimes correlated or anti correlated, also with other cellular functions in the same and as it was other bacteria … in the GNPS framework in San Diego belong to the same samples as genomes that are in GenBank and which gene …
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… types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … global RNA virome reveals diverse clades of bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled …
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