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Genomic sequencing of single microbial cells from environmental samples
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Natural Prodcast Episode 21: Elizabeth Parkinson
… or online catalog, I guess. So we've also been able to get soils from Purdue campus itself and been able to actually … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY …
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FICUS-NERSC/KBASE
… the Letter of Intent; rather proposals are submitted in a single step. …
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Natural Prodcast Episode 14: Nigel Mouncey
… a great opportunity to learn more about JGI, hear some excellent talk from our users and from other invited guests, … and the stabilized isotope probing work that we’re doing, single cell work we’re doing. And using these together along … work to link all this together and try to build a seamless pipeline that takes us through these different capabilities. …
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User Support
… of Work (project roadmap) Users must prepare Materials (Samples) for Submission before they can receive an emailed Approval to Ship Samples that will be subject to the DOE JGI’s capabilities …
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Soil virus offers insight into maintaining microorganisms
… effort, researchers have identified a protein in soil viruses that may promote soil health. The work was … primary focus — replicating itself.  Chitin is found in the cell walls of fungi and the exoskeleton of insects. It is … another DOE Office of Science User Facility, through a single proposal.  …
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Natural Prodcast Episode 4: Nancy Keller
… folks at UW and they collect all this DNA from various samples, patients, this and that. They’re doing all this 16S … parasite you really can’t grow well. You have to have it in cell culture. So we are going to see if we can express that … alone – I’m interested in pathogens. It’s just never a single microbe. And we have several recent papers and are …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science … a multi-institutional team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming … one DOE Office of Science National User Facilities in a single project. …
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Sequencing of Genomes from Environmental Single Cells
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Power in isolation: insights from single cells
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Natural Prodcast Episode 12: Nadine Ziemert
… of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, … all the time. We have compared three very different soils in the area around Tübingen that is almost next to … ZIEMERT: A lot of groups working together, having a lot of samples, sequencing a lot of environments, varied with a lot …
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CSP Functional Genomics
… are encouraged to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while samples that are of insufficient quality or quantity will …
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