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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … like E. coli , and then being able to look using the metabolomics capabilities also at JGI — it’s really cool that it’s … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … to sort of compare, conceptually, that data with genomics and the kind of things that I do with genome mining. … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … of tough plants. Thanks to gut microbes — namely, anaerobic fungi — these animals are able to pry apart plant polymers … break down plants.  In 2016, her team leveraged transcriptomics and other assays to identify and test …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a really … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s … Please review our FAQ in advance of contacting the PMO office.  …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance … that can then be functionally characterized.  Our metabolomics platform delivers rich metabolite profiles from …
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Frequently Asked Questions: Project Management
… DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … The majority of JGI projects come from the user community. Find out about …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected as …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, …
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