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User Support
… authentication enabled to log in. Check our Help Site for additional information, including a Login Walkthrough … Project design with Principal Investigator Providing a general orientation to JGI systems to Investigators … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 1: The Primer, Part 1
… Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … what we’re calling a Primer. We wanted to try and give a general audience some of the basics of natural products … by almost all living organisms. So almost all of these reactions are going on in your body. Almost all of these …
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JGI-TMF Critical Minerals and Materials Call
… Minerals and Materials call represents a unique opportunity for researchers to request the capabilities and expertise of … of critical minerals and materials. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Natural Prodcast Episode 6: Marc Chevrette
… Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … it smells like a pine tree. Like there’s no cookie cutter reactions here, we’re really trying to drive discovery. So …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Primer and platform effects on 16S rRNA tag sequencing
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Natural Prodcast Episode 7: Ben Shen
… of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help access complicated natural product gene clusters, and we’re all really excited about that, and …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours …     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … (PIs), Co-PIs, and collaborators. *Unique users are counted once, even though an individual may have several …
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FICUS-NERSC/KBASE
… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as part of the … call do not use the Letter of Intent; rather proposals are submitted in a single step. …
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Natural Prodcast Episode 20: Brian Bachmann
… I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a …
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