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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government … joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … profiles from diverse biological and environmental samples by using advanced computer analysis coupled with …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … and agriculture. Understanding the compositions of river microbiomes—who the core microbes are and what they do—can … The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so that researchers could …
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Natural Prodcast Episode 17: Cassandra Quave
… Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … or plant-derived compounds that were assessed through standardized methods, through broth microtiter dilution, and …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … technology in order to enhance the quality of single-cell genomes and directly link functional information with …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … functional genome annotation, improves understanding of the role small molecules play in diverse biological … profiles from diverse biological and environmental samples using advanced liquid chromatography mass …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … something that strikes your fancy when you start collecting samples for later processing? BRIAN BACHMANN: Yeah, well, …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a perfect storm in … This is our conversation with Professor Ben Shen, from The Scripps Research Institute (TSRI) …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … rich and underappreciated. And we’ve worked both with the microbiome. So, with symbiotic bacteria that live in animals … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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