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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … probably only a handful of genomes that had been accomplished, and one of those by JGI. And it took them years to … from University of California (UC), San Diego and Scripps Institution of Oceanography (SIO). You can find the podcast …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … here at Scripps to our very, very well-known and accomplished ecologists, they said, oh, come on. What are you …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … as well, so the versions of antiSMASH that we published since then. So we’re now nearing version six. But … are a few other efforts maybe that are out there and doing slightly different approaches, but antiSMASH has become the I …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … were co-opted into symbiotic functions. Recently published in  Nature Communications , the work was led by a … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … water. These vents are too deep in the sea to get any sunlight, and yet they still support a unique array of … Genomes & Microbiomes (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding …
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Natural Prodcast Episode 18: A CSP Primer
… UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … from different angles, different questions asked, and published over and over again. But again, with different research … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Leveraging single-cell genomics to expand the fungal tree of life
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Diversity of cytosine methylation across the fungal tree of life
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It … Embargo : A period in which data is not publicly available in JGI systems or … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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