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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …
Learn more
Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … of chance in life. And so, if I go back, and I look at my seventh grade list of goals in life: on that list are being … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … is an amazingly complex marine bacterium. There are seven species known now, three very common ones. And they’re … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 17: Cassandra Quave
… that is often done, where we’re really just looking at DNA sequences, and we don’t always know necessarily or pay … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … environment you mentioned, you know that they can have consequences to marine life that surrounds it, whether it be …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … ALISON: Hmm. It kind of – it’s kind of like I’m smelling bacterial perfume. I mean – but it’s purposeful so it’s some …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … of the opinion that on the geological timescale, that most bacterial natural product systems evolved, you know, a …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … And so there are different ways that we decided which sequences made it onto that list. So the majority of them …
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Microbiome Data Science Team
… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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