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FICUS-NERSC/KBASE
… plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing Projects …
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User Support
… that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … issues that may arise. You may monitor the status of your sequencing project at any time by logging on to the Genome … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 12: Nadine Ziemert
DAN UDWARY: I’m sitting on my bed in Paris, pointing a microphone at my face because I didn’t want to be in the other … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Synthesis
… chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The team has three subgroups: Synthetic …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data … access to information regarding genome and metagenome sequencing projects, and their associated metadata, around …
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Viral Genomics Group
… abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 11: Marnix Medema
… and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … we noticed that BiG-SCAPE was very scalable compared to approaches before that. But when you wanted to include more …
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Better Crops With a Pointillist Approach to Plant Genomics
And eventually, their findings could help us grow better crops, with less impact on our planet. …
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Examples: Successful LOIs & Submissions
… plant environment interactions to enable advanced bioenergy crops … Characterization of simplified soil communities with …
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Natural Prodcast Episode 7: Ben Shen
… started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … what the drug wants to do. ALISON: Okay, so it’s for drug applications. Is it any particular kinds of drugs? Like … well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly …
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Frequently Asked Questions: Proposal Submission
… proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, … contact us in advance for advice. … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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