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A Grass Model to Help Improve Giant Miscanthus
… perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis … back vigorously year after year (perenniality). The Impact Among the long-term aims for bioenergy feedstock crops are … The reference genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit …
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Natural Prodcast Episode 20: Brian Bachmann
… mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really … Ecopia and collaborators’ landmark genome mining paper: “A genomics-guided approach for discovering and expressing …
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Natural Prodcast Episode 19: Bill Fenical
… in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything …
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Metabolomics Program
… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … This program integrates cutting-edge metabolomics with genomic data to gain insights into how small molecules …
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Natural Prodcast Episode 14: Nigel Mouncey
… about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … , like metabolomics , like some of the more directed genomics approaches, DAPseq and the stabilized isotope … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 12: Nadine Ziemert
… Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …
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JGI Portals
… fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a session via … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …
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DNA Synthesis Program
… The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … Program plays a central role in advancing functional genomics, focusing on developing genetic systems that can … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Natural Prodcast Episode 15: Katherine Duncan
… that’s just incredible to think about. And then, from an genomic point of view, I mean, I don’t need to say to you, … researchers, just now, to access protocols and share them among– I like to think we all recognize that there’s people … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 6: Marc Chevrette
… Handelsman’s group at the University of Wisconsin, where, among lots of other things, he works on the Tiny Earth … by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … of the opinion that on the geological timescale, that most bacterial natural product systems evolved, you know, a …
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Rex Malmstrom
… and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral … Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the Stable …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… the hidden diversity of “microbial dark matter”–that uncultured and unknown majority of microbes in, on and … around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 … Award for Exceptional Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke is the …
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