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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for … projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
Learn more
Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are …
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User Support
… define the scope of work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
Learn more
New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Natural Prodcast Episode 17: Cassandra Quave
I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … comes to our existing libraries. Some of the limitations of platforms like GNPS, it’s very poor in terms of annotations … And we looked at both the chemistry and the pharmacological effects against bacteria.  And what was interesting is that …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … ALISON TAKEMURA: Hey, Dan. DAN UDWARY: So we recorded the Primer episode a little while ago. And the primer episode, … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Natural Prodcast Episode 8: Eric Schmidt
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … you describe the project. Could you just give a short primer for someone who is familiar with biology, but not … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 7: Ben Shen
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … that comes across in the interview. If you listened to the Primer episodes, then you heard me talk about JGI’s Earth … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …
Learn more
Partnerships Development Team
… in 2017, the PDT was established in part to help better-connect industry to JGI resources, as well as target … help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … Synthesis Science Program Head Ian Blaby, JGI DNA Synthesis Platform Lead Grace Sprehn, JGI Policy & Agreements Analyst …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission process. You can review … applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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User Advisory Committees
Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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