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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of Oceanography. He got me into genomics of microbes, specifically of some that lived in the ocean and made some … to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps purpurea, can infect grain. And …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … fundamental things, like, are we waking them up? Are they metabolically active and slowly ticking away at these … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … nucleus of amoebae. The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … more customized analysis, the JGI also participates in publication of results. See more details on our Review … .  … What happens after I submit? … Prospective users with specific questions regarding their proposed research are …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … data science, and the development of new informatics tools specifically optimized for high-performance computing … partner in enabling systems biology analyses, such as metabolic modeling, that go well beyond genome annotation …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … different approaches. Some of them have been actinomycete-specific approaches. And you can enrich for rare … to merge with the synthetic biology community, with the metabolic engineering community because the skill sets are …
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Exploring Phages at JGI
… college student, I never really entertained the possibility of working at a national laboratory. However, through the …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile …
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