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… enjoyed mentoring. I enjoyed teaching and just helping the next generation of researchers in natural products and in other … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … Episode Transcript … the Secondary Metabolism Collaboratory, or SMC , JGI’s new data portal for natural product biosynthetic gene clusters. …

… that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD and … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … together a fantastic program. So I’m looking forward to the next couple of days. Yeah, yeah. So you are at the Scripps … products? But we are no longer using, say, my mentor’s generation relying on brute force of conventional chemistry, …

… I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … different soils in the area around Tübingen that is almost next to each other, to see if it makes a difference– if I …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project … How To Create an Annotated GenBank File There are several easy-to-use …

… to the idea that you could go internationally to do the next stage of your training and that there might be more to … projects. And so, now, we’re seeing this sort of new generation of tools come along, which provide a much broader … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … Systems Biology Knowledgebase and the National Microbiome Data Collective.    …

… falls outside of that. And so, for me, I think the next step was thinking about what I wanted to do with … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … really exciting work on figuring out how to get genomic sequencing data for the fungus garden because it’s more …

… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … train students and professors in laboratory techniques and data analyses compile original data for improving fungal … resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, …

… stable? And those are important to us before we ask those next questions of will it work on many different substrates? … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or … so starting from some of the enzymes that we had the most data on and knew the most about, working with my …

… provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … the Department of Energy (DOE) has invested in training the next generation workforce through funding opportunities managed … and developmental support from KBase (The Department of Energy Systems Biology Knowledgebase). Myco-Ed is …

… him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … that is evolving in one direction. Then, of course, the next question is, which is this direction? What is the fate? … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …