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Products
… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all products are available …
Learn more
Natural Prodcast Episode 18: A CSP Primer
… If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … student, if you don’t have a track record yet, you need to build a team around this project, right? So you need to have … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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DNA Synthesis Program
… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. … over 70 projects, including gene synthesis, combinatorial pathway design, and efforts to refactor entire …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … all those art history photos of the, you know, various old buildings in in Rome didn’t quite do it for me. And at the … or they can store that chemical – or they can store the cells, as well. And so we’re hoping initially to be able to …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural … of secondary metabolism. Hey there, and welcome back to Natural Prodcast, and this will be episode 11. This … is done through also a process where you say, OK, I want to build this feature, then you– well, Simon is currently …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … protein or the genes that you are analyzing. And then we’re building phylogenies a lot, making phylogenetic trees, and …
Learn more
Natural Prodcast Episode 17: Cassandra Quave
… and Sciences. She’s an ethnobotanist and the herbarium curator there, with a broad range of experimental work on plants … I put a lot of emphasis in my program on research capacity building. And I think this is something I’d love more … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Fungal & Algal Program
… Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … the biological mechanisms that enable fungi and algae to play a vital role in carbon cycling, biodegradation and … This research helps translate their genomic potential into practical applications, including sustainable biofuels, …
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Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyo n
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global … cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate brands couldn’t exist without … high quality modern standard and includes RNA-seq data. The improved  T. cacao Matina 1-6 genome is now available for …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A … really haven’t been paying attention. And so we’ve tried to build SMC to be a transparent and open system. And so what … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Building Sphagnum Genomic Resources
… (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon … impact on global carbon cycling and climate is estimated to be larger than any other single plant genus. Peatlands … Early Career Research Program. Oak Ridge National Laboratory is managed by UT-Battelle, LLC for the U.S. Department …
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