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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … United States. They also provided multiple access points to the information. The team harnessed a community-science … and agriculture. Understanding the compositions of river microbiomes—who the core microbes are and what they do—can …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … in collaboration with other people, lake sediments. We have microbiomes from different organisms, including the human …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of … us launching our second metabolites group, we launched an initiative at JGI which is really a pilot in bringing … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well … from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of … now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Partners
The JGI leverages its existing partnerships and develops others providing complementary expertise to advance the science and serve as impact multipliers . The … DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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JGI Portals
Our data platforms are a key resource for the broader scientific … open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic databases and analytical … Genomes Online Database … Integrated Microbial Genomes and Microbiomes … Integrated Microbial Genomes — Plasmid …
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Natural Prodcast Episode 18: A CSP Primer
… … DAN UDWARY: It’s been a while, but Natural Prodcast is back … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort … have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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