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… components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … state-of-the-art data processing and analysis pipelines for the interpretation of microbiome omics data Developing …

… work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … at a time when they would do one genome at a time. And the whole purpose of that was that it was one of the first … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. … … SPPs enable research funded by an Industry partner to perform a defined scope of work using the JGI’s unique … technology called chassis-independent recombinase-assisted genome engineering (CRAGE), which offers single-step genomic …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … in how we can build tools which will let us see the whole landscape of natural products. So you know, for … spectrometry hardware, software, new developments in NMR methods, ultra fast methods for acquisition. Things like …

The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … and researchers, facilitating the transition from genomic sequences to biological inference and understanding of …

It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … of those individuals. Also, if you need a “Materials and Methods” section, we can provide that information as well. …

… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … them. And so, I spent a number of years trying various methods, back in the old days, to figure out how they’re … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design … enabling ever-higher levels of throughput. We also develop methods for efficient QA/QC based on next-generation … group: The applications group is focus on developing methods for converting digital information from sequence …

Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … on a team at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept … before. DAN: Yeah, yeah, fun stuff.  MARC: And we call that whole thing, the “chemistry hub”, and that’s centered right …

Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate methods SynTrack and associated tools, which track samples …