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Natural Prodcast Episode 16: Marcy Balunas
Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … you bring a unique perspective too? And so I was fascinated by – we spend a lot of time as natural products chemists and …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … Science Program , or CSP, which is the main mechanism by which users work with our facility to do science. Since I … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is … twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how … fall into two main groups: two ecotypes dwell in the sunlit upper waters (above 200 m, or 656 ft), and have genes …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … program supports cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for … analyzing enzymes to support mission-driven research. Rapid Metabolic Engineering: Metabolic engineering traditionally …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. … warmer waters, including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind … encoded in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to a more sustainable …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Metabolite release by nitrifiers facilitates metabolic interactions in the ocean
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … and computational analysis, JGI scientists are able to link metabolic activity with gene expression, providing deeper … state-of-the-art instrumentation and informatic approaches.By bridging genomics with metabolomics, the Metabolomics …
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User Support
… collaborate with users to develop project requirements, define the scope of work and outline roles and responsibilities … your Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal … and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace … sequenced algal genomes and genome annotations generated by the JGI and by others. The web portal allows users to …
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