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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … approach, we employ various omics technologies, strain engineering and experimental characterization methods, in …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance … state-of-the-art sample processing.  Our DNA synthesis platform enables users to test hypotheses via designed and …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring … needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and … time, the team is expanding current capabilities in strain engineering and functional assays and supporting new …
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Plant Program
… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy sources and bolster …
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Natural Prodcast Episode 15: Katherine Duncan
… I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … fundamental things, like, are we waking them up? Are they metabolically active and slowly ticking away at these … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … environment – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major …
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader community.  We focus our efforts on integrating database mining and sequence design … and understanding the design principles for successfully engineering pathways to function in heterologous hosts, by …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … medicine” as a way of the future. We’re really good at engineering small molecules into microbes and making those …
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