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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … genomes. Fungal plant, algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … things when it comes to energy cycles — turning biomass into things like ethanol or hydrogen, or solar energy into …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … thought I’d take an academic job then, but I ended up going into industry. Saw a job at Roche, and that was to work with … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … marine natural products chemist, Richard Moore, and get into seaweed, robots, algae, and biocatalysis — and he makes … then the organisms all around us or the, you know, the bio matter that’s around us now? Brad: Yeah, I mean, petroleum …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … always wanted to write a book but it’s really hard to break into that area. I mean you have to secure an agent and … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … This research helps translate their genomic potential into practical applications, including sustainable biofuels, … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … functional genome annotation, improves understanding of the role small molecules play in diverse biological …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … than it is now. Or a little more– yeah, put more rationale into drug discovery by knowing what these things actually do … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Machine learning sheds light on microbial dark proteins
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and you can still make more of it, then you start going into human trials or animal trials first, and going through … lot of like synthetic chemistry effort to create a bunch of novel compounds that actually didn’t pan out. DAN: And there …
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