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The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … (incl location in genome, coding/vs non, syn vs non-syn aa change etc) and structural rearrangements, alignment files … assembly from virus pools/plaques obtained from a single host, many unordered contigs. Assembly, annotation ( IMG ) …

Research in the Eloe-Fadrosh group focuses on using genome-resolved … ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … Nayfach … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As much as we … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … metals with our cultures.  And we see some very interesting changes in the chemistry when we– so if you use too much of …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … even know of your existence back then. So there was no hostilities. Dan Udwary: That is certain, yes. So welcome. I … a challenge, and there is actually some cases where we’ve changed things in antiSMASH because, well, some things were …

… in a certain way from one bacteria to another, how do they change then, and why are they really made. I think that’s a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … at the end to get the compound expressed in a heterologous host strain. DAN UDWARY: Yeah, sure. That’s very similar to …

… being used to essentially domesticate a range of different host organisms through introducing “landing pads” that you … NIGEL MOUNCEY: Well, we hope that all of the vaccines and controls that are in place will help us get on top of this … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… will be monumental as the last episode with Alison as my co-host. We recorded this an awfully long time ago, and she’s … I was in graduate school too. And I think some of that’s changed now. My perception is that a lot of that competition … chemistry and to really put the chemistry into the ecological experimental protocols. So that took about 15 …

Research in the Woyke laboratory focuses on the utility of … E. A., Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, … will be the development of tools and infrastructure for microbiome data science, and the development of new …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing … metatranscriptomes. It provides rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance …

… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …