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Phylogenetic, genomic organization and expression analysis of hydrophobin genes in the ectomycorrhizal basidiomycete Laccaria bicolor
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Expanding genomics of mycorrhizal symbiosis
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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CSP Functional Genomics
Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … and signatures of horizontal gene transfer. … The SMC provides complete sequence and annotation data for secondary …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. … on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. And Karen Serrano and …
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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A genetic linkage map for the ectomycorrhizal fungus Laccaria bicolor and its alignment to the whole‐genome sequence assemblies
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact …
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Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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