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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Novel Structural Elements within the Nonproteolytic Clostridium botulinum Type F Toxin Gene Cluster
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … we began looking at microbiomes associated with various invertebrate organisms, whether it be sponges, or other …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … near this tree and so there was probably some historical evolutionary event where the DNA transferred from the fungus …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … Program through a proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species …
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Axel Visel
Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … sequence-based methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … collaborate with users to develop project requirements, define the scope of work and outline roles and responsibilities … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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