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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … into undergraduate teaching laboratories with minimal overhead (cost of media, ITS sequencing and …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism of some more novel …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … lucky to get some time to sit down and have a great chat with him.  I kind of lost count of how many times Brad used … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 …     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is … for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … document. At the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … Office.  At the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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