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… I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … terms of what we’re doing with the JGI with the Secondary Metabolites Collaboratory and trying to have a good catalog …

… that will help solve energy and environmental challenges. Sorghum stands out as a candidate feedstock for biofuels thanks to its drought and flood hardiness. Even with little water, full … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …

… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user … Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science …

… it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … the genes that code for the proteins that produce secondary metabolites. Do you recognize this? DNA 🡺 RNA 🡺 Protein … are proteins that do chemical reactions. And so secondary metabolites come from reactions, of enzymes and sometimes …

… biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … way. We also work with our partners to ensure platforms are future-ready for advancements enabled by artificial intelligence and … will be the development of tools and infrastructure for microbiome data science, and the development of new …

… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … based on annotation may not be sufficient. A more recent effort in the Woyke lab is therefore focused on the …

… Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … Scripps. So we’re looking at biosynthesis of marine fungal metabolites. We’re also looking– now we’re started a newer … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … declared a position on candy corn, which is perfect timing for an October podcast release. I hope that doesn’t get me … lots more to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this conversation with Alison …

… over there, with a few more questions specific to secondary metabolites. I hope both versions are worth listening to! If … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … permission) demonstrate the importance of proper nucleic acid quantification in our Illumina and PacBio sequencing …

… authentication enabled to log in. Check our Help Site for additional information, including a Login Walkthrough and FAQ . –– The … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …