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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … JGI Metabolomics Platform delivers rich metabolite profiles from diverse biological and environmental samples using … as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified using …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist …

Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … I’m interested in the world of natural products is also twofold but for different reasons to learn about how nature … sense. Yeah, it’s been a long time since I’ve actually isolated some proteins off the bench. I am well aware of the …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … mining, and how we might start to better connect those two things, because I think that’s ultimately what needs to …

… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … that got me into natural products to be truthful. So, well, two things. My PhD work was with a fungal pathogen called …   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes …

… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

See below for a list of Frequently Asked Questions about our proposal submission … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, …