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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural world’s … discussion with the JGI Plant Genome Advisory Committee and DOE, designating a set of JGI plant genomes that are the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … scientists to drive innovations that align with DOE's missions. … The DNA Synthesis Program plays a central … design-build transition in synthetic biology engineering workflows. … The IMG/M system serves as a community resource …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … management and strategic objectives of the microbial and metagenome programs. The committee serves as the program's …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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New Lineages of Life Group
… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … nucleus of amoebae. The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of … some computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the …
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