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Synthetic Biology Lab
… of throughput. We also develop methods for efficient QA/QC based on next-generation sequencing technologies including …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… lab, I got great exposure to working with Streptomyces, learning more about genome mining, as well as isolation and … JACKIE: So they're very much developed their own language based on-- DAN: Sure. JACKIE: Yeah, they've evolved. That's … Got it. Got it. JACKIE: Interesting. Do they still have the active site serine? BETSY PARKINSON: They do still have an …
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Natural Prodcast Episode 7: Ben Shen
… configuration of electrons that becomes really reactive. And so, different types of enediyne molecules can … How can you design a drug, right? You design drugs  based on certain knowledge, without which, you know… If you … data, another area I see a great potential will be machine learning and artificial intelligence. I would view that will …
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Metabolomics Program
… responses. The program employs advanced mass spectrometry-based methods to analyze metabolites from a wide range of … network:   ENVnet   is a comprehensive, mass spectrometry-based molecular network of metabolites designed to demystify … advanced liquid chromatography mass spectrometry (LC-MS) based methods in combination with advanced computational …
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Microbial Program
… the functional capability of microbial communities based on their metagenome sequence, in the context of …
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User Support
… access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Meeting Code of Conduct
… respectfully on diverse ideas and a commit to free inquiry based on evidence and criticism. …
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Natural Prodcast Episode 20: Brian Bachmann
… systems to do synthetic analoging of some really complex bioactive natural product molecules. It’s a wide ranging … we started to see this potential of looking for compounds based on these gene clusters. And that was my job at the … Allison Walker at Vanderbilt is coming up with machine learning techniques just to look at clusters and start to …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… tools. And then also, if we do have something that’s active against them, maybe this has a new scaffold and … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … great tool. It’s the best thing that we have. And its rule-based analysis is second to none. And it’s the most valuable …
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Frequently Asked Questions: Proposal Submission
… instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, go to the … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Micro-Scale Applications Group
… answer questions such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell … us to select specific uncultivated microbes for sequencing based on their level of metabolic activity (BONCAT+FACS). To …
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Natural Prodcast Episode 5: Brad Moore
… ways that we can correlate environmental signals back to active transcription. There’s always been a big mystery in … to really challenge me, and as being sort of a laboratory based scientist, to get out onto the ocean and do ocean … suite of chemicals that you could make through petroleum-based synthesis, Alison: As we understand it now, I guess. …
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