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… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a … Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect …

… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or … DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including …

… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … If we are only interested in that final product, which is completely potent and specific to the target we’re thinking … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … genome sequence, in about 40% of the genome the genes were completely unidentifiable. You had no idea what they were …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This represents … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. …

… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … or something, but they confirmed that it had just been completely consumed. DAN UDWARY: Grad students need calories …

… Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … trying to understand that system is just not possible from– completely understanding the system is not possible from the …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified resident bacteriophages …

… know, I’m here to find a job. I would like to do something completely new. And that is to begin to study the organic … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … with known receptors, but we also have ones that are completely their own cluster. And so we're hypothesizing …