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… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … genome sequence, in about 40% of the genome the genes were completely unidentifiable. You had no idea what they were …

… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … or something, but they confirmed that it had just been completely consumed. DAN UDWARY: Grad students need calories …

… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … with known receptors, but we also have ones that are completely their own cluster. And so we're hypothesizing …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … trying to understand that system is just not possible from– completely understanding the system is not possible from the …

… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… know, I’m here to find a job. I would like to do something completely new. And that is to begin to study the organic … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After sequencing/metabolomics has completed, your Project Manager will initiate analysis with … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: …