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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … all connected. And you can color these nodes. For example, based on taxonomy, or based on class of biosynthetic …
Learn more
JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … accelerating discoveries and developing transformative bio-based technologies that address challenges in the sourcing, … provides customized analysis, the JGI also participates in publication of results. Go here for a video and Q&A with …
Learn more
Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … great tool. It’s the best thing that we have. And its rule-based analysis is second to none. And it’s the most valuable …
Learn more
FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s … provides customized analysis, the JGI also participates in publication of results. …
Learn more
Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
Learn more
DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual …     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Each portal lists a contact, or you can reach out via the form on our website.   …
Learn more
Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … The majority of JGI projects come from the user community. Find …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … really functional genomics. And there’s a lot of sequencing based approaches, of course, now that we can use to figure … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint … Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … you for that insight. DAN: So I suppose, coming up with large collections of new microbes and new activities, feeds …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … of the international cooperative biodiversity group (ICBG) based in Panama and was dual there and at Scripps where I … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
Learn more
Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … While an ever-increasing number of phage and virus genomes have been assembled and reported from … Multiomics approaches such as metagenomics and metatranscriptomics …
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