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… of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these … actually does is not something that you can do with bioinformatics. And I think– I hope we don’t ever lose track … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … pellets. So, we’re about ready to send those for genomic analysis. And of course, we don’t know anything about the …

… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … to do it. You have the sequencing capacity, you have the bioinformatics, but also you have all the emerging …

… proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in … metadata about the samples, and the sample QC results. … Analysis and annotation of publicly available projects can … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s … or the submission of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in …

… to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you … Then you have to maybe improve some of your bioinformatic analysis. You don’t want to get clusters that are encoding …

… by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … and experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… able to not only purchase their own HPLC to enable faster analysis of their plant extracts, but also establish their … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … our work has been focused on exploring the possibilities of bioinformatics and ways to mine spectroscopic data. So the …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …