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… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … the sponges or other things. And we know lots more about microbiomes and symbionts that live with other organisms, …

… chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … Not a big leap, but then we began looking at microbiomes associated with various invertebrate organisms, … in a microalgae. There were four genes there. Not like a bacterial gene cluster, but they were still clustered in the …

As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … of the opinion that on the geological timescale, that most bacterial natural product systems evolved, you know, a … applicable insights there as well. ALISON: Kind of what facilitates colonization of a new environment and like what …

… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … repositories until the earliest of three points:  (1) publication of the data (including, but not limited to, …

BARONA-GOMEZ: Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a … could be a reasonable number if you are talking about a plant and a microbe interacting very stably. So it makes … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of … 10 to the negative 9th. Picomolar, 10 to the negative 12th. DAN: Yeah. So very-- BETSY PARKINSON: Very, very-- … were not enantio or diastereomeric pure. And so there were studies that were done previously with SVR. But because …

Team    … Nayfach S et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun … these projects. Assembly, annotation for ( Phytozome for plant, Phycocosm for algae) depends on genome Plant and …

… ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ …

… from the PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory … communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional …

Journal publication caps JGI pilot project with fledgling Florida … ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome … Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was …