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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, processing and visualization of “big … in demonstrating the power of data science in tackling grand challenges in Biology, with a special focus on …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree … to provide valuable reference genomes in under-populated areas of the tree of life, as reference genomes are critical …
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Institutional User Agreements
… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … microbial communities to uncover the complex interactions and functions that shape ecosystems. By decoding the …
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Metabolomics
… at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … metabolomics products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental … Exploring the fascinating world of giant viruses, which challenge our understanding of viral … Understanding the complex relationships between microbes and …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and … microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis … You can visit the Products & Offerings section of our website for more details, including … user community. Find out about JGI’s calls for proposals , and submit your proposal online using the Work Initiation …
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Homepage
… video includes external footage from: University of Delaware; Laura.Selbmann©PNRA. All the sampling activities in Antarctica have … of University and Research; all specimens collected and fungi isolated are preserved in the Culture Collection of …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate … genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The … protocols, course materials and bioinformatics exercises are freely available through the links below. Naturalist …
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …
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